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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947518.1_cds_XP_016489183.1_79734
CDS Infomation

[gene=LOC107809102] [db_xref=GeneID:107809102] [protein=L-aspartate oxidase, chloroplastic-like] [protein_id=XP_016489183.1] [location=join(68277..68410,68555..68918,69010..69252,69355..69411,69513..69593,70024..70085,70309..71314)] [gbkey=CDS]
Sequence

ATGGCAACTGGTATCGCTTCAGGATGCGGACAGTTACACTTGAGGAAGCCTGTCTACTTG
AGGAATAGCTATGGAAATAAAGCTCACTGTCATTCCAATGTGATTCTCAACGGCACGCAA
AACCAGATCGCTTGGTCTAGTTGGGTTTCAAATGTCTTGCGAGTTAATAGAAGTAGCTAT
CCAGAATGTCAAGTGATCAAGACAAACTGGAAGTCTAGCCGAGGAACAATCAAATCGTGC
CAGCAGAGAGATGGATCAGTTACTAGGTACTTCGATTTCACTGTGATTGGTAGTGGAATT
GCTGGCCTTCGATATGCACTTGAGGTTGCCAAGCATGGAACTGTGGCTGTAATAACCAAG
GCTGAGCCACATGAGAGTAGCACTAACTATGCTCAAGGTGGTGTAAGTGCTGTGCTCTGC
CCTTTGGATTCAGTGGAGAGCCATATGCAAGATACAATTGTGGCAGGTGCTTATCTCTGT
GATAAGGAGACTGTTAGAGTAGTGTGTACTGAAGGACCTGAGAGAATTAGAGAACTGATC
GCTATGGGTGCTTCATTCGATCATGGGGAGGACGGAAATCTGGATCTAGCCAGGGAAGGA
GGCCACTCCCATCGTCGAATTGTCCATGCTGCTGATATGACTGGCAGAGAGATAGAAAGA
GCTCTATTAGAGGCAGTTTTTAAGAATCCTAATATACATGTGTTTCAACACCATTTTGCT
ATAGATTTGTTGACCACTCAGGATGGTTCTGACATAGTATGTCATGGCGTTGATACTATA
CACACGGAAACGAAGGAGGTTATAAGATTCATTTCAAAAGTGACTTTGCTGGCATCAGGT
GGAGTTGGACATATCTATCCAAGTACTACTAATCCGACGGTTGCAACTGGTGATGGAATG
GCTATGGCTCATCGAGCTCAAGCTGTAATTTCCAACATGGAGTTTGTGCAATTCCACCCA
ACTGCCTTGGCTGATGAAGGCCTTCCCAACATACCAAGTGCCAGAGAGAATGCTTTTTTG
ATAACTGAAGCTGTCAGAGGTGATGGAGGCATCCTTTACAACTTAGATATGGAAAGATTT
ATGCCAATGTATGATGAAAGAGCAGAACTTGCCCCGAGAGATGTGGTAGCAAGAAGTATA
GATGACCAGCTCAAAAAGCGTGGCGAAAAGTATGTTCTTCTTGATATCAGTCACAAGCCC
AGAGAGAAGGTTCTTTCTCATTTTCCTAATATAGCTGCTGAGTGTCTCCGCCATGGGTTA
GACATAACACAGCAGCCGATTCCGGTGGTTCCTGCTGCTCACTACATGTGTGGTGGAGTC
CGTGCTGGACTCGAGGGTGAGACTAATGTGCAAGGTCTTTATGTGGCAGGTGAAGTTGCA
TGTACTGGTTTACATGGTGCTAACCGACTTGCTAGCAACTCATTGCTTGAAGCACTAGTG
TTTGCACGAAGAGCTGTACAGCCTTCAATTGATCATGTGAACGTGTCTAGAATTGATCAC
GGTGCTTCAAGTTGGTGGCCGCGGCCTGTAGCCCCCATGGTACTAGGAGATACAGTACTT
AACAAAGTCATCTGTCGGACAAGGGAAGTGAGGAAAGAACTACAGTCAATCATGTGGGAA
TATGTTGGAATTGTTAGGTCTAACTCAAGACTAAACACTGCTGAGAAGAGAATCAGAGAG
TTGGAGTTGGAATGGGAAACATACCTATTTCAGCATGGCTGGGAACCAACAATGGTTGGA
GTAGAGGCTTGTGAGATGAGGAATCTCTTCTGTTGTGCCAACTTGGTAGTTAGCAGTGCT
CTTTCTCGACATGAGAGTCGTGGGCTTCACTACACCACTGATTTTCCTCATGTTGAGGAA
AGCGAGAGGTTGCCAACGGTCATTTTTCCTTCTCAGCGAAATAACTCATGGAGCTCACGC
CAATTACACGCGCAGCCGATAAGTTAG

Peptide Sequence

PEP ID

XP_016489183.1
PEP Infomation

PREDICTED: L-aspartate oxidase, chloroplastic-like [Nicotiana tabacum]
Sequence

MATGIASGCGQLHLRKPVYLRNSYGNKAHCHSNVILNGTQNQIAWSSWVSNVLRVNRSSY
PECQVIKTNWKSSRGTIKSCQQRDGSVTRYFDFTVIGSGIAGLRYALEVAKHGTVAVITK
AEPHESSTNYAQGGVSAVLCPLDSVESHMQDTIVAGAYLCDKETVRVVCTEGPERIRELI
AMGASFDHGEDGNLDLAREGGHSHRRIVHAADMTGREIERALLEAVFKNPNIHVFQHHFA
IDLLTTQDGSDIVCHGVDTIHTETKEVIRFISKVTLLASGGVGHIYPSTTNPTVATGDGM
AMAHRAQAVISNMEFVQFHPTALADEGLPNIPSARENAFLITEAVRGDGGILYNLDMERF
MPMYDERAELAPRDVVARSIDDQLKKRGEKYVLLDISHKPREKVLSHFPNIAAECLRHGL
DITQQPIPVVPAAHYMCGGVRAGLEGETNVQGLYVAGEVACTGLHGANRLASNSLLEALV
FARRAVQPSIDHVNVSRIDHGASSWWPRPVAPMVLGDTVLNKVICRTREVRKELQSIMWE
YVGIVRSNSRLNTAEKRIRELELEWETYLFQHGWEPTMVGVEACEMRNLFCCANLVVSSA
LSRHESRGLHYTTDFPHVEESERLPTVIFPSQRNNSWSSRQLHAQPIS

Transcript Sequence

Gene sequence data has not been registered.